Course Information


Course Information
Course Title Code Semester L+U Hour Credits ECTS
PCR APPLICATIONS IN AQUACULTURE 801700805130 3 + 0 3.0 10.0

Prerequisites None

Language of Instruction Turkish
Course Level Graduate Degree
Course Type Compulsory
Mode of delivery Presentatin and Discussion
Course Coordinator
Instructors
Assistants
Goals This course starts with the historical development process of the polymerase chain reaction (PCR) and explaining the differences with the current direct PCR protocols and related common PCR based applications used in aquaculture and explaining the kinetics of PCR.
Course Content Basic concepts such as optimization of the PCR, primer design, analysis of PCR products, sequencing, in vitro expression, purification and cloning will be discussed. Also, the Real Time PCR (RT-PCR), normalization and analysis of RT-PCR data will be given within contents of this course. After the basic concepts, most common PCR based techniques used in aquaculture area, like species identification, DNA barcoding, metabarcoding, environmental DNA and designing minibarcodes will be discussed using examples from latest studies.
Learning Outcomes 1) "Comprehension of general theory of PCR based molecular techniques "
2) Understanding of the interactions between molecular biology and its applications in aquaculture
3) Conceive a general approach to PCR based molecular techniques in aquaculture

Weekly Topics (Content)
Week Topics Teaching and Learning Methods and Techniques Study Materials
1. Week Molecular Biology in Life Sciences Lecture
Colloquium
Problem Based Learning
Homework
2. Week Single Gene Inheritance Lecture
Colloquium
Problem Based Learning
Homework
3. Week Independent Assortment of Genes Lecture
Colloquium
Problem Based Learning
Homework
4. Week Mapping Eukaryote Chromosomes by Recombination Lecture
Colloquium
Problem Based Learning
Homework
5. Week The Genetics of Bacteria and Their Viruses Lecture
Colloquium
Problem Based Learning
Homework
6. Week Gene Interaction Lecture
Colloquium
Project Based Learning
Homework
7. Week DNA: Structure and Replication Lecture
Colloquium
Problem Based Learning
Homework
8. Week RNA: Transcription and Processing Lecture
Colloquium
Problem Based Learning
Homework
9. Week Proteins and Their Synthesis Lecture
Colloquium
Problem Based Learning
Homework
10. Week Gene Isolation and Manipulation Lecture
Colloquium
Problem Based Learning
Homework
11. Week Regulation of Gene Expression Lecture
Colloquium
Problem Based Learning
Homework
12. Week Regulation of Gene Expression in Eukaryotes Lecture
Colloquium
Problem Based Learning
Homework
13. Week The Genetic Control of Development Lecture
Colloquium
Problem Based Learning
Homework
14. Week Genomes and Genomics Lecture
Colloquium
Problem Based Learning
Homework

Sources Used in This Course
Recommended Sources
Griffiths, A. J. F., Wessler, S. R., Caroll, S. B., & Doebley, J. (2008). Introduction to Genetic Analysis 10th.

Relations with Education Attainment Program Course Competencies
Program RequirementsContribution LevelDK1DK2DK3
PY15000
PY25000
PY35000
PY45000
PY55000

*DK = Course's Contrubution.
0 1 2 3 4 5
Level of contribution None Very Low Low Fair High Very High
.

ECTS credits and course workload
Event Quantity Duration (Hour) Total Workload (Hour)
Course Duration (Total weeks*Hours per week) 15 3
Work Hour outside Classroom (Preparation, strengthening) 15 10
Homework 5 8
Presentation (Including Preparation Time) 3 12
Report (Including Preparation and presentation Time) 1 4
Midterm Exam 1 10
Final Exam 1 10
Total Workload
Total Workload / 30 (s)
ECTS Credit of the Course
Quick Access Hızlı Erişim Genişlet
Course Information