Course Information


Course Information
Course Title Code Semester L+U Hour Credits ECTS
CHEMISTRY OF HETEROCYCLIC COMPOUNDS II 801300715560 3 + 0 3.0 8.0

Prerequisites None

Language of Instruction Turkish
Course Level Graduate Degree
Course Type Compulsory
Mode of delivery Lecture, question-answer, discussion, case study research
Course Coordinator
Instructors
Assistants
Goals To give information about the basic concepts, methods, and applications of computational Chemistry. To gain the ability to use the software packages that performs theoretical calculations and application to a variety of chemical events
Course Content Electronic structure methods; ab initio molecular orbital methods (Moller-Plesset Perturbation theory), density functional theory (DFT) and their applications in organic chemistry. Open and closed shell systems, Roothaan-Hall equations, basis sets, electron correlation, hybrid methods (G2, IMOMO, IMOMM, QM / MM) and modeling systems in solutions. Comparison of the accuracy and the use of the different methods. Applications in current program packages: GAUSSIAN and SPARTAN
Learning Outcomes 1) Understands that organic compounds and their properties, not only in the lab, can also be found theoretically with the computer ,
2) Knows current package programs and uses by selecting the appropriate program
3) Calculates physical and chemical properties of molecules of all kinds.
4) Uses the Computational Chemistry in calculation of the geometry and properties of organic molecules
5) Explaines the organic reaction mechanisms.
6) Design new molecules.
7) Selects and uses the appropriate basis set
8) Understands that organic compounds and their properties, not only in the lab, can also be found theoretically with the computer

Weekly Topics (Content)
Week Topics Teaching and Learning Methods and Techniques Study Materials
1. Week Electronic Structures Methods Lecture; Question Answer; Problem Solving; Discussion
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
2. Week Self-Consistent Field Lecture; Question Answer; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
3. Week Hartree-Fock Model. Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
4. Week Electron Correlation Methods. Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
5. Week Ab Initio Moleccular Orbital Theory. Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
6. Week Basis sets Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
7. Week Density Function Theory (DFT). Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
8. Week Z-matrix, energy calculations, Geometry Optimization, potential energy surfaces (PES). Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
9. Week The IR Calculations. Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
10. Week Optimization Of The Transition State Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
12. Week The Thermochemistry Of Reactions Lecture; Question Answer; Problem Solving; Discussion
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
13. Week Reaction Kinetics. Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
14. Week modeling of the solvated systems with ab initio and DFT methods . Lecture; Question Answer; Problem Solving; Discussion; Case Study
Colloquium
Problem Based Learning
Homework Practice (Teaching Practice, Music/Musical Instrument Practice, Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice)
15. Week Final Exam Question Answer

Homework

Sources Used in This Course
Recommended Sources
A. R. Leach, “Molecular Modelling: Principles and Applications”, Second Edition, Pearson Education EMA, 2001.
Christopher J. Cramer, “Essentials of Computational Chemistry: Theories and Models”, John Wiley & Sons Ltd., England, 2004.
Clark, T.:”A Handbook of Computational Chemistry, A Practical Guide to Chemical Structure and Energy Calculations”, 1 st Ed, Wiley-Interscience Publication, New York, U.S.A., (1985), 99-101.
Frank Jensen, “Introduction to Computational Chemistry”, John Wiley & Sons Ltd., England, 2007.
Hehre, W.J.; Radom, L. ; Schleyer, P.V.R.; Pople, J.A.: “Ab Initio Molecular Orbital Theory”, 1 st Ed, Wiley-Interscience Publication, New York, U.S.A.,1986.
J. Foresman & A. Frisch Exploring Chemistry with Electronic-Structure Methods, 2nd Edn., Gaussian Inc., Pittsburg PA, 2003.
Levine, I. N., ”Quantum Chemistry”, Englewood Cliffs: Prentice-Hall, 2000.
Ramachandran, KI; Deepa, G.; Namboori, K.: “Computational Chemistry and Molecular Modeling. Principles and Applications”, Springer-Verlag Berlin Heidelberg, Germany, 2008.

ECTS credits and course workload
Event Quantity Duration (Hour) Total Workload (Hour)
Course Duration (Total weeks*Hours per week) 14 3
Work Hour outside Classroom (Preparation, strengthening) 14 5
Homework 5 10
Practice (Teaching Practice, Music/Musical Instrument Practice , Statistics, Laboratory, Field Work, Clinic and Polyclinic Practice) 14 2
Midterm Exam 1 2
Time to prepare for Midterm Exam 1 15
Final Exam 1 2
Time to prepare for Final Exam 1 30
Total Workload
Total Workload / 30 (s)
ECTS Credit of the Course
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